| Story Title | Originally in: | Reprinted In: |
| Brave and the Bold #50 | "Wanted: The Capsule Master", w/ Green Arrow, vs. super-powered criminals impersonating "Martians" | Brave and the Bold #114 |
| Brave and the Bold #56 | "The Raid of the Mutant Muraders", w/ Flash and Hawkgirl, vs. Aliens imitating fusions of JLA members | Brave and the Bold #112 |
| Detective #225 | "The Strange Experiment of Dr. Erdel" - I: J'onn Jon'zz, the Manhunter from Mars, I: Professor Erdel, O: Martian Manhunter, D: Professor Erdel, I:Robot Brain, assumes the identity of John Jones and joins the police force | Secret Origins #1 (1961), World's Finest #175, World's Finest #226, Silver Age Classics reprints Detective #225 |
| Detective #226 | "The Case of the Magic Baseball" - Rounds up the Devon gang (does not appear in costume) | World's Finest #176, World's Finest #226 |
| Detective #227 | "The Man with 20 Lives" - brings in killer Monte Fisk | Best of DC Digest #30 |
| Detective #228 | "Escape to the Stars" | The Greatest 1950's Stories Ever Told |
| Detective #229 | "The Phantom Bodyguard" - Protects a millionare from murder (Only appears as martian briefly to scare sharks) | |
| Detective #230 | "The Sleuth without a Clue" - Must solve case without powers, suggests that rays from Mars account for his abilitires (does not appear in costume) | |
| Detective #231 | "The Thief Who Had Super-Powers" - Captures an escaped criminal from Mars (does not appear in costume) | |
| Detective #232 | ||
| Detective #233 | "The Ghost From Outer Space" - Use shape-changing powers to haunt a gang of crooks (does not appear in costume) | |
| Detective #234 | ||
| Detective #235 | "The World's Greatest Magician" -solves circus crimes disguised as a stage magician (does not appear in costume) | |
| Detective #236 | "The Great Earth-Mars Mystery" - Communicates with Mars for first time, father appears | |
| Detective #237 | ||
| Detective #238 | "Earth Detective for a Day" - A comet deprives Jon'zz of his powers, forcing him to catch a crook as Jones (does not appear in costume) | |
| Detective #239 | "Ordeal by Fire" - A series of short cases in which Jones must deal with fire, his main weakness (Only briefly in martian form) | |
| Detective #240 | "The Hero Maker" - helps a fellow cop get one headliner arrest before he retires | |
| Detective #241 | "The Impossible Manhunt" - vs. Craig Smith a serial bomber/arsonist destroying places named "Jones" | |
| Detective #242 | "The Thirty Fathom Sleuth" - Jon'zz must recover evidence dropped in the ocean | |
| Detective #243 | "The Criminal From Outer Space" - vs. the alien Tor who possess a local gangster (does not appear in costume) | |
| Detective #244 | "The Four Stunts of Doom" - Jones uses his martian powers to help out a director friend (does not appear in costume) | |
| Detective #245 | ||
| Detective #246 | I: Diane Meade | |
| Detective #247 | "The Impossible Messages" - breaks up a ring of smugglers guided by tourist planes | |
| Detective #248 | "The Martian Without A Memory" - An accident makes John Jones forget that he is J'onn Jon'zz | |
| Detective #249 | "Target for A Day" - disguises himself the governor after the execution of a gang leader | |
| Detective #250 | "The Stymied Sleuth" - capture the Ganges gang after a radium heist | |
| Detective #251 | "Alias Mr. Zero" - Jones infiltrates a gang of art theives as 'Mr. Zero' | |
| Detective #252 | "The Menace of the Super-Weapons" - defeats criminals with vibrational technology (only briefly in costume) | |
| Detective #253 | ||
| Detective #254 | "One-Man Army" - thwarts the schemes of criminal using miltary strategy | |
| Detective #255 | "The World Wide Manhunt" - Jon'zz tracks the globe to find a witness and save an innocent condemned man | |
| Detective #256 | "The Carnival of Doom" - frightens criminals into the arms of the cops in a tunnel ride at the carnival | |
| Detective #257 | "King of the Underworld" - Jones pretends to quit the force and join the mob to expose criminals (remains invisible) | |
| Detective #258 | "The Jinxed Ship" - helps out new ship captain against saboteurs | |
| Detective #259 | "The Getaway King" - I: Monty Moran, the Getaway Genius, vs. the Getaway Genious | |
| Detective #260 | "John Jones' Super Secret" - Surreptitiously helps fellow cop find confidence | |
| Detective #261 | "The Midget Manhunter" - J'onn Jon'zz defeats scientist with shrinking ray | |
| Detective #262 | ||
| Detective #263 | "The Crime Conjurer" - vs. The Conjurer, a villain using stage magic in his crimes | |
| Detective #264 | "The Menace of the Martian Weapons" - crooks find Martian weapons from a space craft and start a crime wave | |
| Detective #265 | "The Fantastic Human Falcon"- vs. the Falcon | |
| Detective #266 | "The Challenge of the Masked Avenger" - a lovesick circus performer gets the idea to win his love's heart by assuming a costumed identity and the Manhunter must keep him from killing himself | |
| Detective #267 | "J'onn Jon'zz Farewell to Earth" -When visitors from Jupiter arrive to pursue an escaped convict, Jon'zz is tempted to hitch a ride home | |
| Detective #268 | "The Mixed Up Martian Powers" - A flaming meteor causes Jon'zz to develop alternative versions of his powers | |
| Detective #269 | "The Man Who Exposed Jones Jones" - A blackmailer extorts Jones when Jones thinks his secret identity has been compromised | |
| Detective #270 | "The Hunted Martian"- catches crook while disguised as game hunter | |
| Detective #271 | "The Lost Identity" - criminals accidentally "lock" Jones in his Martian form when they steal Erdel's Robot Brain from a museum | |
| Detective #272 | "The Super Sleuth's Bodyguard"- lets partner defeat criminals while he assists secretly | |
| Detective #273 | "The Unmasking of J'onn Jon'zz" - When the Martian criminal B'rett arrives on Earth, the Martian Manhunter is forced to go public with his existence | |
| Detective #274 | "The Human Flame"- vs. the Human Flame (guy with built in blow torches) | |
| Detective #275 | ||
| Detective #276 | "The Crimes of John Jones" -Criminals take advantage of the Martian Manhunter's amnesia to get him to commit crimes | |
| Detective #277 | "The Menace of Mr. Moth" - vs. Mr. Moth | |
| Detective #278 | ||
| Detective #279 | "The Impossible Inventions" - Trailing a crook is hampered by a well-meaning but dangerous inventor named Hiram Horner | |
| Detective #280 | "Bodyguard to a Bandit" - A witness tries to get to jail to avoid a vengeful criminal | |
| Detective #281 | "The Menace of Marsville" - Thwarts crooks at "martian" exhibit | |
| Detective #282 | "The Girl with Martian Powers" - Fakes super-powers in Diane to scare off crooks threatening her life | |
| Detective #283 | "The Amazing One-Man Crew" - foils a plot to ruin a ship's captain | |
| Detective #284 | "The Courtship of J'onn Jon'zz" - Diane Meade decides to court her detective partner | |
| Detective #285 | "Menace of the Martian Mandrills" - vs. apes from Mars | |
| Detective #286 | "His Majesty, John Jones" - A small European nation names Jones to replace a missing heir to the throne | |
| Detective #287 | "J'onn Jon'zz Kid Brother" - Jon'zz's brother T'omm is accidentally snagged by the Robot Brain, I: T'omm | |
| Detective #288 | "The Case of the Honest Swindler" - Crooks trick a friend of the Manhunters with phony magic devices | |
| Detective #289 | "J'onn Jon'zz - Witch Doctor" - thwarts crooks threatening a tribe of African natives | |
| Detective #290 | "Lights, Camera ....Doom!" - When Diane takes a job as a stunt girl to catch a saboteur, the Manhunter must keep a watchful eye | |
| Detective #291 | ||
| Detective #292 | "The Ex-Convicts Club" - breaks up reunion of crooks including the Human Squirrel | |
| Detective #293 | "The Girl-Hero Contest" - works behind the scenes to help Diane and Sally in a police heroine contest | |
| Detective #294 | ||
| Detective #295 | "The Martian Show-Off" - stages spectacular feats to impress "author" who is actually a kidnapper | |
| Detective #296 | "The Alien Bodyguard" - captures crooks while quietly tailing Diane | |
| Detective #297 | "J'onn Jon'zz vs. the Vigilantes" - thwarts citizens who form a self-appointed lawmen group | |
| Detective #298 | "The Man Who Impersonated J'onn Jon'zz" - Helps an aspiring actor who plays him in stage shows | |
| Detective #299 | "Bodyguard for a Spy" - Jones tails a Princess to expose an espionage ring | |
| Detective #300 | "The J'onn Jon'zz Museum" - defeats crooks who figure out his weakness to fire after a trip th the museum | |
| Detective #301 | "The Mystery of the Martian Marauders" - A scientist develops a machine that can contact Mars and it transports Martian criminals to Earth, Jon'zz briefly returns to Mars to stop them | |
| Detective #302 | ||
| Detective #303 | ||
| Detective #304 | "The Crime College" - dismantles Professor Proxon's educational program for criminals | |
| Detective #305 | "J'onn Jon'zz vs. Futureman" - vs. a criminal martian, B'enn Brn'zz, from the year 2062 | |
| Detective #306 | "Last Days of J'onn Jon'zz" - meteorite temporarily causes power loss when a criminal with a menagerie of giant robot animals goes on a crime spree | |
| Detective #307 | "Alias Scarface Scanlon" - Jones breaks up a ring of criminal helping crooks escape by infiltrating it | |
| Detective #308 | "The Day John Jones Vanished" - Jon'zz has a power aberration while on a case in the European nation of Lavonia | |
| Detective #309 | "The Man Who Saved Earth" - Jon'zz disguised himself as an ordinary human that aliens kidnap to determine the feasibility of invading Earth | |
| Detective #310 | "The Miniature Manhunter" - vs. Victor Vance who shrinks Jon'zz to miniature size | |
| Detective #311 | "The Invaders from the Space Warp" - defeats alien ivnaders from a parallel dimension, I:Zook, J'onn's alien companion | |
| Detective #312 | "J'onn Jon'zz's Pesky Partner" - vs. Doc Duggan and gang, Zook learns Manhunter's secret identity | |
| Detective #313 | "The Wizard Who Conquered J'onn Jon'zz" - vs. a elusive gang leader who has discovered an ancient wand | |
| Detective #314 | "J'onn Jon'zz vs. John Jones" - vs. an escaped Saturnian criminal | |
| Detective #315 | "The Man of 1,000 disguises" - vs. Porto, a thief and master of disguise | |
| Detective #316 | "The Bandits with Super-Powers" -An alien meteorite gives 3 common criminal super-powers | |
| Detective #317 | "Challenge of the Alien Robots!" - thwarts criminal Jasper Dowds when he goes on a crime spree with recovered alien robots | |
| Detective #318 | "J'onn Jon'zz enemy - Zook!"- vs. amnesiac Zook and gangsters | |
| Detective #319 | "J'onn Jon'zz" - Wizard of 1463" - Travels back in time for medieval adventure | |
| Detective #320 | "The Case of the Golden Eagle" - thwarts a phone French police officers attempt to steal a French objet d'art | |
| Detective #321 | ||
| Detective #322 | ||
| Detective #323 | ||
| Detective #324 | "The Beast That Was J'onn Jon'zz" - The Manhunter gets stuck in the form of a monster | |
| Detective #325 | ||
| Detective #326 | "The Death of John Jones, Detective", - The Manhunter stages the demise of his secret identity to pursue the mysterious artifact known as the Idol-Head of Diabolu, I: Idol-Head of Diabolu | |
| House of Mystery #143 | "The Giant-Maker"- Idol-Head of Diabolu turns beings into wild giants and frees the sorcerer Malador | |
| House of Mystery #144 | "The Weird World of Gilgana",- Idol-Head of Diabolu creates portal to the world of Gilgana | |
| House of Mystery #145 | ||
| House of Mystery #146 | ||
| House of Mystery #147 | "The Orchestra of Doom" - Idol-Head of Diabolu creates criminal musical instruments | |
| House of Mystery #148 | "The Beings in the Color Rings" - Idol-Head of Diabolu unleases creature that "steals" color | |
| House of Mystery #149 | ||
| House of Mystery #150 | ||
| House of Mystery #151 | ||
| House of Mystery #152 | "Iwangis - Creature King" - Idol-Head of Diabolu sends a monster that can animate statuary | |
| House of Mystery #153 | "The Giants Who Slept 1,000,000 Years" - vs. Professor Hugo | |
| House of Mystery #154 | ||
| House of Mystery #155 | ||
| House of Mystery #156 | ||
| House of Mystery #157 | ||
| House of Mystery #158 | ||
| House of Mystery #159 | ||
| House of Mystery #160 | assumes identity of presumed-dead playboy Marco Xavier | |
| House of Mystery #161 | ||
| House of Mystery #162 | ||
| House of Mystery #163 | ||
| House of Mystery #164 | ||
| House of Mystery #165 | ||
| House of Mystery #166 | ||
| House of Mystery #167 | ||
| House of Mystery #168 | ||
| House of Mystery #169 | ||
| House of Mystery #170 | ||
| House of Mystery #171 | ||
| House of Mystery #172 | ||
| House of Mystery #173 | Discovers that "Faceless", the leader of Vulture is the real Marco Xavier |